Fastmatch package

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August undefined, 2024

WebJul 23, 2024 · In fastmatch: Fast 'match()' Function. Description Usage Arguments Details Value Note Author(s) See Also Examples. View source: R/fastmatch.R. Description. fmatch is a faster version of the built-in match() function.It is slightly faster than the built-in version because it uses more specialized code, but in addition it retains the hash table within the … WebThis package implements five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring semantic similarities among DO terms and gene products. Enrichment analyses including hypergeometric model and gene set enrichment analysis are also implemented for discovering disease associations of high-throughput biological data.

fastmatch: Fast

WebMay 2, 2024 · Methods that do build and cache a hash table (such as the fastmatch package) are much faster on subsequent calls (almost instant) but a little slower on the first. Therefore chmatch may be particularly suitable for ephemeral vectors (such as local variables in functions) or tasks that are only done once. Much depends on the length of x … WebJul 23, 2024 · fastmatch: Fast 'match()' Function Package providing a fast match() replacement for cases that require repeated look-ups. It is slightly faster that R's built-in … susan ruth lowe obituary

GitHub - cran/fastmatch: This is a read-only mirror of the …

WebThe package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which … WebApr 9, 2024 · Flexibly restructure and aggregate data using just two functions: melt and 'dcast' (or 'acast'). WebIntroduction. Reshape2 is a reboot of the reshape package. It's been over five years since the first release of reshape, and in that time I've learned a tremendous amount about R programming, and how to work with data in R. Reshape2 uses that knowledge to make a new package for reshaping data that is much more focused and much much faster. susan rocha dighton ma

A C++ version of the %in% operator in R - Stack Overflow

getMatches: getMatches in fastLink: Fast Probabilistic Record …

WebSearch all packages and functions. data.table (version 1.14.8) Description. Usage Value. Arguments. Details, See Also, Examples Run this code # Please type 'example(chmatch)' to run this and see timings on your machine N = 1e5 # N is set small here (1e5) to reduce runtime because every day CRAN runs and ... WebApr 29, 2024 · fl.out. Either the output from fastLink () or matchesLink (). threshold.match. A number between 0 and 1 indicating the lower bound that the user wants to declare a … susan roces and fpj weddingWebAug 3, 2024 · When I reinstalled the R package in r4.0，I found an ERROR. ** R ** byte-compile and prepare package for lazy loading Error: object ‘is.factor.ff’ is not exported by 'namespace:ff' Execution halted ... susan ruffin lawyer

"WebApr 29, 2024 · For the first case (just knowing which are matches, not seeing to which elements they correspond), using the fastmatch-package may help, it has the %fin% (fast-in) function, that keeps a hash table of your array so that subsequent lookups are more efficient. For the second case, there is findMatches in the S4Vectors-bioconductor " - Fastmatch package

Fastmatch package

WebCommunity. data.table is widely used by the R community. It is being directly used by hundreds of CRAN and Bioconductor packages, and indirectly by thousands. It is one of the top most starred R packages on GitHub, and was highly rated by the Depsy project. If you need help, the data.table community is active on StackOverflow. WebJul 5, 2024 · Installing packages directly into that location fixes the issue but is not desirable for all the reasons that people might want to use custom locations (e.g. running multiple versions of the same package, keeping …

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WebFeb 24, 2014 · EDIT: Thanks to @MatthewLundberg and @Yakk for catching my silly errors. If what you really want is just faster matching, you should check out Simon Urbanek's fastmatch package. However, Rcpp does in fact have a sugar in function which can be used here.in uses some of the ideas from the fastmatch package and incorporates … WebInformation on all packages for project r:fastmatch. Packages for r:fastmatch. 55 package(s) known

WebMar 4, 2014 · One thing that is less clear with fastmatch is the life cycle of the hashes. DT, I'm guessing, follows the usual R scoping/GC rules. The good thing about fastmatch is … WebADD REPLY • link 16 months ago Evan 20. 0. As Lori says, this was fixed yesterday. > library (BiocManager) Bioconductor version 3.14 (BiocManager 1.30.16), R 4.1.2 (2024-11-01) > install ("BiocVersion", force = TRUE) Bioconductor version 3.14 (BiocManager 1.30.16), R 4.1.2 (2024-11-01) Installing package (s) 'BiocVersion' trying URL 'https ...

WebJun 22, 2015 · Stack Overflow Public questions & answers; Stack Overflow for Teams Where developers & technologists share private knowledge with coworkers; Talent Build your employer brand ; Advertising Reach developers & … WebWe introduce Fast-Match, an algorithm designed to match large images efficiently without compromising matching accuracy. It derives its speed from only computing features in those parts of the image that can be confidently matched. Fast-Match is an order of magnitude faster than the popular Ratio-Match, yet often doubles matching precision for ...

WebFeb 22, 2024 · fastmatch package module. Version: v0.0.0-...-6bd661e Latest Latest This package is not in the latest version of its module. Go to latest Published: Feb 22, 2024 …

WebMethods that do build and cache a hash table (such as the fastmatch package) are much faster on subsequent calls (almost instant) ... It may be possible to speed up fastmatch's hash table build time by using the technique in data.table, and we have suggested this to its author. If successful, fastmatch would then be fastest in all cases. susan roces heightWebNov 15, 2024 · installing source package 'MetaboAnalystR' ... ** using staged installation ** libs rm -f fortran/decorana.o c/Internal_utils_batch.o c/util.o cpp/melt.o c/fastmatch.o c/nncgc.o c/mzROI.o c/xcms_binners.o Exports.o gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c fortran/decorana.f -o fortran/decorana.o susan roberts theatreWebMay 30, 2024 · fastmatch: Fast 'match()' Function Package providing a fast match() replacement for cases that require repeated look-ups. It is slightly faster that R's built-in … susans accountingWebThe 'enrichplot' package implements several visualization methods for interpreting functional enrichment results obtained from ORA or GSEA analysis. It is mainly designed … susan roswell nm horse breeding and trainingWebJul 23, 2024 · fastmatch: Fast 'match ()' Function. Package providing a fast match () replacement for cases that require repeated look-ups. It is slightly faster that R's built-in match () function on first match against a table, but extremely fast on any subsequent lookup as it keeps the hash table in memory. susan rueth schaefferWebFeb 20, 2014 · fastmatch is a dependency of ffbase. So install it first. install.packages ("fastmatch") – user1600826. Feb 20, 2014 at 10:22. @jwijffels Works brilliantly, … susan saffronWeb:exclamation: This is a read-only mirror of the CRAN R package repository. fastmatch — Fast 'match()' Function. Homepage: http://www.rforge.net/fastmatch - GitHub - cran/fastmatch: This is a … susan ruth wallace